BSC 3364 RESEARCH IN TROPICAL ECOSYSTEMS/
GLY
3630 RESEARCH IN TROPICAL ENVIRONMENTS
LAST MODIFIED 12/03/03
NOTE: If you lose this syllabus, you can download it from the web sites
of the Department of Biological Sciences or Department of Earth Sciences.
Course and Learning
Objectives
– Most courses cover the details of a
particular discipline, but rarely do students come out of classes with a
general comprehension of how scientific research is accomplished. This course
has two learning objectives: 1) to
provide the information all educated people should know about how scientific
research works, using environmental science research as an example; and 2) to
give students who intend to pursue careers in environmental biological science
the basics of how to do research. The course’s objectives are to orient
students to general scientific principles and practice in the first four weeks,
and to present to students case studies in research on the topic of Environmental Biology of the Caribbean to
South Florida, for critical review and discussion. This course is designed for
science majors, and in particular those in biology, geology and environmental
studies. If your major is not in science, please discuss this with one of the
instructors to ensure that your background will be sufficient.
Course Description – This course includes both lectures and group discussions. In the
first four weeks, lectures cover the scientific principles and practices of
doing research, including scientific methods, selecting research topics,
scientific proposals and peer review, and critical thinking. The rest of the semester will put these
principles into practice with research presentations by faculty from the
departments of Biological Sciences, Earth Sciences, and Environmental Studies.
Students take notes on presentations and ask critical questions of speakers
following their talks. The speakers are grouped into five sections by
discipline: (1) Earth Sciences, (2) Evolution, (3) Marine Environmental
Biology, (4) Botanical Environmental Biology, and (5)
Biodiversity/Conservation. Following the speakers in each section, we have a
discussion of a selected reading from that discipline.
(Textbook chapters
corresponding to lectures are shown)
Aug.
25 |
Introduction to research on tropical ecosystems and environments Scientific theories, inference & philosophy (Ch. 1) – Lee |
Aug.
27 |
Scientific
literature, critical thinking, research funding, publication (Ch.
2-3) – Collins |
Sept.
1 |
LABOR
DAY HOLIDAY – UNIVERSITY CLOSED |
Sept.
3 |
Good
research questions, scientific measurement (Ch. 4-5) – Lee |
Sept.
8 |
Research
design (Ch. 6) – Collins |
Sept.
10 |
Using animals in research, philosophical challenges (Ch. 16, 18) – Lee |
Sept.
15 |
Data
analysis (Ch. 17) – Collins |
Sept.
17 |
EXAM
on textbook |
Sept.
22 |
Earth
sciences: Prof. Gren Draper, The Geological
Setting for Caribbean Environments |
Sept.
24 |
Earth
sciences: Prof. Bill Anderson, Stable
Isotope Biogeochemistry: understanding paleoclimate change |
Sept. 29 |
Earth sciences:
Prof. Laurie Collins, Seagrass History of Florida Bay |
Oct.
1 |
Earth sciences Discussion of scientific article: Late Cenozoic Evolution of the Neotropical Mammal Fauna |
Oct. 6 |
Evolution:
Prof. Javier Francisco-Ortega, Macromolecules, plants, and
islands |
Oct. 8 |
Evolution:
Prof. Joel Trexler, Population genetics of Everglades fish:
CANCELLED |
Oct.
13 |
Evolution
Discussion
of scientific article |
Oct. 15 |
Marine environmental biology: Prof. Walter Goldberg, The structure, ecology and distribution of coral reefs |
Oct.
20 |
Marine
environmental biology: Prof. Jim Fourqurean,
Seagrasses of South Florida and the Caribbean |
Oct. 22 |
Marine environmental biology: Prof. Chris
Brown, Adaptation of
fish to changes in the aquatic environment |
Oct.
27 |
Marine-terrestrial transition: Prof. Evelyn Gaiser, The role of
periphyton mats in the Everglades ecosystem |
Oct.
29 |
Marine
environmental biology Discussion of scientific article |
Nov.
3 |
Botanical
environmental biology: Prof. David Lee, How
light intensity and quality determine where and how plants grow |
Nov. 5 |
Botanical
environmental biology: Prof. Stephen
Oberbauer, Tropical and subtropical trees and climate change |
Nov.
10 |
Botanical environmental biology: Prof. Suzanne Koptur, Effects of Key Deer Herbivory on Understory Plants in Lower Keys, Pine Rockland |
Nov.
12 |
Botanical
environmental biology Discussion of scientific article |
Nov.
17 |
Biodiversity/Conservation: Prof. Brad Bennett, Ethnobotany
of South Florida Indians |
Nov.
19 |
Biodiversity/Conservation: Prof. Mike McClain, Nitrogen stocks and fluxes in riparian and upland montane forests of the Andean Amazon Basin |
Nov.
24 |
Biodiversity/Conservation: Prof. Maureen Donnelly,
Reptiles
and amphibians of Central America |
Nov.
26 |
Biodiversity/Conservation: Prof. Joel Heinen: CITES in Nepal |
Dec.
1 |
Biodiversity/Conservation
Discussion of
scientific article |
Dec.
3 |
Review |
Dec. 8 |
FINAL
EXAM, M 3:30-6:15 |
Note
about the exam times: In keeping with
university policy, we will try to make accommodations for students who wish to
observe their religious holidays. Students should make these requests known at
the beginning of the semester.
INSTRUCTORS |
Department |
Email address |
Phone (305) |
Office Hours
|
Dr. David Lee |
Dept. Biological Sciences |
leed@fiu.edu |
348-3111 |
announced in class |
Dr. Laurie Collins |
Dept. Earth Sciences, Dept. Biological Sciences |
collinsl@fiu.edu |
348-1732 |
M 2:00-3:30,. T 8:30-10:00, PC 435 |
Course Policies – You are expected to be on time to class, and to stay the full period. Each student is expected to participate in discussions and ask questions of lecturers, although not in every class. Read the section below on “In-class speaking and active, responsive listening.”
You are expected to maintain high standards of academic honesty. Any student found in violation of these standards will earn an automatic F and be reported to the Deans Office, no exceptions made. In accordance with FIU's policy on academic honesty, as set forth in Section 2.44 of the Academic Affairs Policies and Procedures Manual (http://academic.fiu.edu/docs/aapolicies.htm), it is expected that students in BSC-3364 and GLY-3630 will not submit the academic work of another as their own. Additional discussion of academic honesty and integrity may be found in the Manual.
All
cell phones and beepers must be turned off during class, unless they are
set to vibrate only.
Textbook – Fred Leavitt, 2001,
“Evaluating Scientific Research, Separating Fact From Fiction,” Prentice Hall,
ISBN 0-13-012845-7. This costs about $30 new in the bookstore.
Reading scientific articles
– One
article will be assigned for each of the DISCUSSION classes (5 total), and one
reading will be recommended by each speaker (15 total). They will be available
as downloadable files through the library’s Course Reserves listing. The
articles assigned for DISCUSSIONs will be general scientific publications on
the subject of one of the five disciplines. We will discuss the objectives,
results, implications for larger questions, and failures of these articles.
DISCUSSIONs are meant to give you practice in critical thinking and voicing
your views. The speakers’ readings are meant to orient you to the subject
matter before the presentations, so you are expected to read the article
assigned by each speaker BEFORE the lecture.