Principal Investigator
Prem Chapagain
- Professor, Department of Physics, College of Arts, Sciences & Education
- Associate Director, Biomolecular Sciences Institute
- Affiliated Professor, Department of Chemistry and Biochemistry
- Fellow, Honors College
- Faculty Director, Honors Nepal Study Abroad Program
Prem Chapagain is a Professor of Physics at Florida International University and Associate Director of the Biomolecular Sciences Institute. His research combines physics-based molecular simulation, structural biology, and artificial intelligence to understand how biomolecules move, interact, and function. His group applies these computational and machine-learning approaches to problems in biology and drug discovery with direct relevance to human health, from viral assembly and antibiotic resistance to RNA-targeted therapeutics. He is particularly interested in harnessing emerging AI technologies to accelerate how we understand and design biological systems.
He has been recognized by a number of teaching and research awards, including the 2022 Faculty Senate Award for Faculty Excellence in Research and the 2019 Faculty Senate Award for Faculty Excellence in Teaching. Dr. Chapagain has a highly successful record of teaching and mentoring both graduate and undergraduate students.
ORCID 0000-0002-0999-4975 · chapagap@fiu.edu
Theoretical Biophysics at FIU includes two faculty (Gerstman & Chapagain). Dr. Gerstman’s page can be accessed here.
PhD Students
Sadeq Shobani
Bacterial cell wall
Expected 2027
Prabin Dahal
Friedreich’s ataxia (FRDA)
Expected 2029
Jeanpierre Fuente
DNA repair
Expected 2029
Andy Tavel
RNA–protein interactions
Expected 2029
Laxmi Chataut
Circular RNA
Expected 2029
Bhaskar Joshi
Peptide design
Expected 2030
Garima Joshi
Glycoproteins
Incoming · expected 2031
Postdocs & Visiting Scholars
- Dr. Samuel PitaVisiting Associate Professor2025–2026 Current
- Dr. Yasir MamunCourtesy Postdoc2025–present Current
- Dr. Chooda KhanalCourtesy Postdoc2024–2025
- Dr. Elumalai PavadaiPostdoc2016–2018
- Dr. Narayan AdhikariAPS International Fellow2011
Undergraduate & High School Researchers
Current undergraduates
- Chancelin Dixon (Florida Heart Research Fellow)
- Haniel Louijuste Perez
- David Hernandez
- Jaed Pizzaro
High school summer interns
- Konstantina Papadaki (2025)
- Meyli Lopez (2024)
- Samaira Chaddah (2024)
- Ankith Sureddi (2023)
- Emily Brown (2023)
- Eliza Lannon (2022)
Past undergraduates
- Konstantina Papadaki (SRI)
- Oscar Delgado
- Aakash Shrestha
- Ally Aguado
- Anjani Mogallur
- Briana Gonzalez
- Jayleen De La Rosa
- Daniel Diaz
- Polina Evdokimova
- Cathy Padilla
- Yumi Mendez
- Jonathan Najman
- William Castillo
- Nadia Lupiano
- Karina Falcone
- Ilan Chemamma
- Zubair Awan
- Camila Uzcategui
- Rojesh Shakya
- Benjamin Gross
- Ana Preza
- and others
PhD Alumni
| Name | Degree | Research | Currently |
|---|---|---|---|
| PhD 2026Physics | A-to-I RNA editing | Postdoc, Johns Hopkins University | |
Hugo Perez |
PhD 2025Physics | Antibiotic peptides | Postdoc, University of Delaware |
Yasir Mamun |
PhD 2024Biochemistry | Topoisomerases | Faculty, Nova Southeastern University |
| PhD 2024Physics | VP40–membrane interactions | Postdoc, University of Miami | |
Tej Sharma |
PhD 2024Physics | VP40 | Postdoc, SUNY Buffalo |
Md. Lokman Hossen |
PhD 2022Physics | Viral proteins | Faculty, University of Barishal, Bangladesh |
Prabin Baral |
PhD 2022Physics | Epitope screening | Postdoc, University of Maryland |
| PhD 2022Physics | Fluorescent proteins | Nepal | |
Nisha Bhattarai |
PhD 2021Physics | Marburg VP40 | Postdoc, Case Western Reserve University Real Triumph Graduate |
Rudramani Pokhrel |
PhD 2020Physics | Antimicrobial peptides | Bioinformatics Core, Arizona State University Real Triumph Graduate |
Jeevan GC |
PhD 2017Physics | Transformer proteins | Postdoc, Washington State University Worlds Ahead Graduate |
Timothy Steckmann |
PhD 2016Physics | Amyloid beta | Formerly adjunct faculty, FIU |
Chola Regmi |
PhD 2014Physics | Fluorescent proteins | Data scientist, Texas state government Worlds Ahead Graduate |
Yuba Bhandari |
PhD 2013Physics | Lattice models | Postdoc, Johns Hopkins University Worlds Ahead Graduate |
Hugo Perez
Yasir Mamun
Tej Sharma
Md. Lokman Hossen
Prabin Baral
Nisha Bhattarai
Rudramani Pokhrel
Jeevan GC
Timothy Steckmann
Chola Regmi
Yuba Bhandari